Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs59023875 chr16:50375346 G/GT CYLD chr16:50775961-50835846:+ 0.6 5.47 1.28E-6 Box Plot
ACC rs590391 chr20:44390333 T/C WFDC3 chr20:44376583-44420571:- 0.91 6.58 2.32E-8 Box Plot
ACC rs59079925 chr7:98204938 G/A TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs59179879 chr17:62976591 C/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs59222460 chr4:141796588 C/G IL15 chr4:142557752-142655140:+ 0.89 5.25 2.83E-6 Box Plot
ACC rs59222569 chr19:15120787 C/T TECR chr19:14627897-14676792:+ 0.53 5.06 5.59E-6 Box Plot
ACC rs593042 chr1:245211264 T/G EFCAB2 chr1:245133007-245290466:+ 0.66 5.5 1.19E-6 Box Plot
ACC rs59403188 chr17:62976657 A/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs59481434 chr7:72196683 G/A TYW1B chr7:72023729-72298777:- 1.27 8.83 6.35E-12 Box Plot
ACC rs59490819 chr17:62976404 C/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs59514276 chr6:86246716 T/TA SNHG5 chr6:86370668-86388454:- 0.68 5.29 2.52E-6 Box Plot
ACC rs59723879 chr2:61670199 C/CAT C2orf74 chr2:61372203-61391964:+ 0.59 5.64 7.01E-7 Box Plot
ACC rs59745480 chr7:98210276 C/T TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs59830886 chr6:86393247 G/GAGAAGAGAGGAGTGA SNHG5 chr6:86370668-86388454:- 0.69 5.33 2.18E-6 Box Plot
ACC rs59915006 chr2:132259374 A/G LOC150776 chr2:132250386-132279149:+ 0.62 8.73 9.2E-12 Box Plot